Noel O'Blog

Saturday, 11 August 2007

Move over FORTRAN: Python makes inroads into computational chemistry

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Old-school dyed-in-the-wool computational chemists like to use FORTRAN and C a lot, argue about which is better, and create programs whose n...
4 comments:

Librarians go Web 2.0

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Yes, librarians are doing it too. To begin with, my Greasemonkey userscript for adding bloggers' quotes to journal pages has just gotte...
Friday, 10 August 2007

Access embedded molecular information in images

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Recently Rich Apodaca has been discussing ( here , here and here ) embedding molecular information in images of molecules, such as a PNG fi...
Friday, 27 July 2007

Quick thoughts: Poignant Ruby, Bryan Vickery, Python in Browsers, Another ChemRank

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If I ever learned a programming language just to read the book, the language would be Ruby and the 'book', "Why's (Poignant...
Tuesday, 17 July 2007

ccWeb - A lightweight web service for parsing computational chemistry

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cclib is a Python library for enabling package-independent computational chemistry algorithms. At its core is a parser for comp chem output...
Thursday, 12 July 2007

Pybel - Just how unique are your molecules? Part II

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I recently posted on using SMILES, Fingerprints and InChIs to identify unique molecules in a dataset. Geoff pointed out that I should have...
5 comments:
Tuesday, 10 July 2007

Pybel - Hack that SD file

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At some point, most cheminformaticians need to hack at SD files . Maybe they need to extract the values of particular data fields, or add in...
12 comments:
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